Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.83■□□□□ 0.45
TO15178 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TO15178 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TO15178 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.83■□□□□ 0.45
TO15178 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TO15178 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.83■□□□□ 0.45
TO15178 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TO15178 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.83■□□□□ 0.44
TO15178 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.83■□□□□ 0.44
TO15178 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.83■□□□□ 0.44
TO15178 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TO15178 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.83■□□□□ 0.44
TO15178 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TO15178 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.83■□□□□ 0.44
TO15178 AC113410.3-201ENST00000623366 203 ntBASIC17.83■□□□□ 0.44
TO15178 Z82202.1-201ENST00000623446 1880 ntBASIC17.83■□□□□ 0.44
TO15178 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.83■□□□□ 0.44
TO15178 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.83■□□□□ 0.44
TO15178 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TO15178 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.82■□□□□ 0.44
TO15178 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.82■□□□□ 0.44
TO15178 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.82■□□□□ 0.44
TO15178 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TO15178 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
TO15178 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.82■□□□□ 0.44
TO15178 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.82■□□□□ 0.44
TO15178 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.82■□□□□ 0.44
TO15178 CD177P1-201ENST00000606252 935 ntBASIC17.82■□□□□ 0.44
TO15178 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.82■□□□□ 0.44
TO15178 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.82■□□□□ 0.44
TO15178 CR392000.1-201ENST00000624770 1228 ntBASIC17.82■□□□□ 0.44
TO15178 AL031985.4-201ENST00000642138 673 ntBASIC17.82■□□□□ 0.44
TO15178 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
TO15178 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.82■□□□□ 0.44
TO15178 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.82■□□□□ 0.44
TO15178 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.82■□□□□ 0.44
TO15178 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TO15178 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TO15178 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.81■□□□□ 0.44
TO15178 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.81■□□□□ 0.44
TO15178 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.81■□□□□ 0.44
TO15178 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TO15178 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TO15178 Z85996.1-201ENST00000494644 937 ntBASIC17.81■□□□□ 0.44
TO15178 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.81■□□□□ 0.44
TO15178 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.81■□□□□ 0.44
TO15178 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TO15178 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.81■□□□□ 0.44
TO15178 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.81■□□□□ 0.44
TO15178 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.81■□□□□ 0.44
TO15178 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.81■□□□□ 0.44
TO15178 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.81■□□□□ 0.44
TO15178 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TO15178 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TO15178 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.81■□□□□ 0.44
TO15178 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TO15178 AC007952.6-201ENST00000573168 2673 ntBASIC17.8■□□□□ 0.44
TO15178 AC003957.1-201ENST00000625108 2673 ntBASIC17.8■□□□□ 0.44
TO15178 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms