Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PIK3CDO00329 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PIK3CDO00329 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
PIK3CDO00329 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PIK3CDO00329 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PIK3CDO00329 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.96■■□□□ 1.11
PIK3CDO00329 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.96■■□□□ 1.11
PIK3CDO00329 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.96■■□□□ 1.11
PIK3CDO00329 SDHAP1-207ENST00000440850 2000 ntBASIC21.96■■□□□ 1.11
PIK3CDO00329 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 TSPY14P-201ENST00000303979 915 ntBASIC21.96■■□□□ 1.11
PIK3CDO00329 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.96■■□□□ 1.11
PIK3CDO00329 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.96■■□□□ 1.11
PIK3CDO00329 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 CKBP1-201ENST00000565489 1086 ntBASIC21.96■■□□□ 1.11
PIK3CDO00329 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.96■■□□□ 1.11
PIK3CDO00329 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.96■■□□□ 1.11
PIK3CDO00329 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PIK3CDO00329 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.96■■□□□ 1.11
PIK3CDO00329 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
PIK3CDO00329 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PIK3CDO00329 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
PIK3CDO00329 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PIK3CDO00329 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.95■■□□□ 1.1
PIK3CDO00329 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PIK3CDO00329 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
PIK3CDO00329 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.95■■□□□ 1.1
PIK3CDO00329 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.95■■□□□ 1.1
PIK3CDO00329 EGLN1P1-201ENST00000531623 762 ntBASIC21.95■■□□□ 1.1
PIK3CDO00329 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 C2orf69P3-201ENST00000565542 1120 ntBASIC21.95■■□□□ 1.1
PIK3CDO00329 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.95■■□□□ 1.1
PIK3CDO00329 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.95■■□□□ 1.1
PIK3CDO00329 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PIK3CDO00329 PCDHAC2-203ENST00000615316 3011 ntBASIC21.95■■□□□ 1.1
PIK3CDO00329 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.95■■□□□ 1.1
PIK3CDO00329 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PIK3CDO00329 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PIK3CDO00329 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.94■■□□□ 1.1
PIK3CDO00329 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PIK3CDO00329 AC073130.3-201ENST00000624389 2278 ntBASIC21.94■■□□□ 1.1
PIK3CDO00329 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PIK3CDO00329 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
PIK3CDO00329 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIK3CDO00329 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PIK3CDO00329 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
PIK3CDO00329 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.94■■□□□ 1.1
PIK3CDO00329 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.94■■□□□ 1.1
PIK3CDO00329 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIK3CDO00329 PRSS44-201ENST00000515154 1146 ntBASIC21.94■■□□□ 1.1
PIK3CDO00329 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.94■■□□□ 1.1
PIK3CDO00329 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.94■■□□□ 1.1
PIK3CDO00329 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PIK3CDO00329 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIK3CDO00329 LINC01568-207ENST00000641790 1380 ntBASIC21.94■■□□□ 1.1
PIK3CDO00329 KRT8P11-201ENST00000409686 1436 ntBASIC21.94■■□□□ 1.1
PIK3CDO00329 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PIK3CDO00329 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.94■■□□□ 1.1
PIK3CDO00329 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.94■■□□□ 1.1
PIK3CDO00329 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
PIK3CDO00329 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
PIK3CDO00329 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.93■■□□□ 1.1
PIK3CDO00329 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.93■■□□□ 1.1
PIK3CDO00329 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
PIK3CDO00329 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.93■■□□□ 1.1
PIK3CDO00329 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.93■■□□□ 1.1
PIK3CDO00329 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.93■■□□□ 1.1
PIK3CDO00329 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.93■■□□□ 1.1
PIK3CDO00329 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PIK3CDO00329 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3CDO00329 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3CDO00329 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3CDO00329 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PIK3CDO00329 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.92■■□□□ 1.1
PIK3CDO00329 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3CDO00329 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PIK3CDO00329 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.92■■□□□ 1.1
PIK3CDO00329 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PIK3CDO00329 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms