Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
DFFAO00273 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.9■□□□□ 0.78
DFFAO00273 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.9■□□□□ 0.78
DFFAO00273 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.9■□□□□ 0.78
DFFAO00273 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
DFFAO00273 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.9■□□□□ 0.78
DFFAO00273 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 ZNF815P-204ENST00000434898 1737 ntBASIC19.9■□□□□ 0.78
DFFAO00273 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DFFAO00273 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
DFFAO00273 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DFFAO00273 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DFFAO00273 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
DFFAO00273 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
DFFAO00273 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DFFAO00273 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DFFAO00273 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.89■□□□□ 0.77
DFFAO00273 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.89■□□□□ 0.77
DFFAO00273 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.89■□□□□ 0.77
DFFAO00273 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.89■□□□□ 0.77
DFFAO00273 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
DFFAO00273 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.89■□□□□ 0.77
DFFAO00273 HTR7P1-201ENST00000538670 1336 ntBASIC19.89■□□□□ 0.77
DFFAO00273 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.89■□□□□ 0.77
DFFAO00273 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.89■□□□□ 0.77
DFFAO00273 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DFFAO00273 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
DFFAO00273 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
DFFAO00273 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.88■□□□□ 0.77
DFFAO00273 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DFFAO00273 LINC01465-201ENST00000408887 1940 ntBASIC19.88■□□□□ 0.77
DFFAO00273 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
DFFAO00273 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
DFFAO00273 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DFFAO00273 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.88■□□□□ 0.77
DFFAO00273 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.88■□□□□ 0.77
DFFAO00273 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.88■□□□□ 0.77
DFFAO00273 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DFFAO00273 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DFFAO00273 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.87■□□□□ 0.77
DFFAO00273 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.87■□□□□ 0.77
DFFAO00273 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
DFFAO00273 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.87■□□□□ 0.77
DFFAO00273 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.87■□□□□ 0.77
DFFAO00273 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.87■□□□□ 0.77
DFFAO00273 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.87■□□□□ 0.77
DFFAO00273 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.87■□□□□ 0.77
DFFAO00273 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
DFFAO00273 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.87■□□□□ 0.77
DFFAO00273 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DFFAO00273 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
DFFAO00273 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms