Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 AL390955.1-201ENST00000428694 934 ntBASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 AC116562.2-201ENST00000507042 360 ntBASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 AC010331.1-201ENST00000611423 582 ntBASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 MIR6786-201ENST00000616843 113 ntBASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 TMEM179-206ENST00000616017 1645 ntBASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPA3F8WFD2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 KRT18P16-201ENST00000510337 1294 ntBASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NPIPA3F8WFD2 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 RCN1P1-201ENST00000400413 996 ntBASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 AL445675.2-201ENST00000620291 557 ntBASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 AC009237.14-201ENST00000609975 1594 ntBASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.62■□□□□ 0.41
NPIPA3F8WFD2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.61■□□□□ 0.41
NPIPA3F8WFD2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
NPIPA3F8WFD2 NAPSB-206ENST00000562112 1266 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms