Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 KRT8P45-201ENST00000414328 1447 ntBASIC16.07■□□□□ 0.16
RNF223E7ERA6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF223E7ERA6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF223E7ERA6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF223E7ERA6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF223E7ERA6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF223E7ERA6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF223E7ERA6 AC112907.2-201ENST00000448639 330 ntBASIC16.05■□□□□ 0.16
RNF223E7ERA6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF223E7ERA6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF223E7ERA6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF223E7ERA6 CKBP1-201ENST00000565489 1086 ntBASIC16.05■□□□□ 0.16
RNF223E7ERA6 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF223E7ERA6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF223E7ERA6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 AP000523.1-201ENST00000398242 1049 ntBASIC16.04■□□□□ 0.16
RNF223E7ERA6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 AL691432.3-201ENST00000621860 400 ntBASIC16.04■□□□□ 0.16
RNF223E7ERA6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF223E7ERA6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.04■□□□□ 0.16
RNF223E7ERA6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 AL137060.1-201ENST00000618151 2648 ntBASIC16.03■□□□□ 0.16
RNF223E7ERA6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RNF223E7ERA6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.03■□□□□ 0.16
RNF223E7ERA6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RNF223E7ERA6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms