Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM238C9JI98 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TMEM238C9JI98 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM238C9JI98 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC13.6□□□□□ -0.23
TMEM238C9JI98 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM238C9JI98 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM238C9JI98 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM238C9JI98 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM238C9JI98 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TMEM238C9JI98 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.6□□□□□ -0.23
TMEM238C9JI98 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 AC006455.2-201ENST00000429931 906 ntBASIC13.59□□□□□ -0.23
TMEM238C9JI98 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 GTSE1-AS1-202ENST00000623117 1518 ntBASIC13.59□□□□□ -0.23
TMEM238C9JI98 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TMEM238C9JI98 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
TMEM238C9JI98 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM238C9JI98 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM238C9JI98 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TMEM238C9JI98 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 pRNA.6-201ENST00000610482 90 ntBASIC13.58□□□□□ -0.24
TMEM238C9JI98 pRNA.5-201ENST00000612139 90 ntBASIC13.58□□□□□ -0.24
TMEM238C9JI98 pRNA.11-201ENST00000618423 90 ntBASIC13.58□□□□□ -0.24
TMEM238C9JI98 pRNA.13-201ENST00000619112 90 ntBASIC13.58□□□□□ -0.24
TMEM238C9JI98 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TMEM238C9JI98 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TMEM238C9JI98 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 AC068880.1-201ENST00000507289 2297 ntBASIC13.57□□□□□ -0.24
TMEM238C9JI98 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.57□□□□□ -0.24
TMEM238C9JI98 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TMEM238C9JI98 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms