Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 AC009113.1-201ENST00000570267 2443 ntBASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 CROCCP5-201ENST00000436658 830 ntBASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 AC026185.1-201ENST00000445748 174 ntBASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 RPS2P52-201ENST00000469610 820 ntBASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.47■□□□□ 0.71
TCRBV9S1A1TA0A576 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 AL031598.1-201ENST00000561511 1773 ntBASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRBV9S1A1TA0A576 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.45■□□□□ 0.7
TCRBV9S1A1TA0A576 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 KRT8P8-201ENST00000434750 1448 ntBASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 YBX1P10-201ENST00000444752 975 ntBASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRBV9S1A1TA0A576 AC092118.2-201ENST00000613495 667 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms