Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUXBA0A1W2PPF3 IRX1P1-201ENST00000438849 1838 ntBASIC15.8■□□□□ 0.12
DUXBA0A1W2PPF3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUXBA0A1W2PPF3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DUXBA0A1W2PPF3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUXBA0A1W2PPF3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DUXBA0A1W2PPF3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.79■□□□□ 0.12
DUXBA0A1W2PPF3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 AL512353.2-201ENST00000448759 1962 ntBASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 FP475955.4-201ENST00000623131 1990 ntBASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 CYP2T3P-201ENST00000601990 817 ntBASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
DUXBA0A1W2PPF3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
DUXBA0A1W2PPF3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
DUXBA0A1W2PPF3 NOC2LP1-202ENST00000452600 2235 ntBASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.76■□□□□ 0.11
DUXBA0A1W2PPF3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms