Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 AL589743.5-201ENST00000616611 1050 ntBASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 AL512353.2-201ENST00000448759 1962 ntBASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 IRX1P1-201ENST00000438849 1838 ntBASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 AL354751.1-201ENST00000412768 1863 ntBASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 TFP1-202ENST00000475455 1573 ntBASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV27A0A0K0K1C4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV27A0A0K0K1C4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms