Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV12-3A0A0B4J271 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.4□□□□□ -0.11
TRAV12-3A0A0B4J271 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 AC092368.3-202ENST00000574180 1591 ntBASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 AC124283.5-201ENST00000624661 1809 ntBASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 GUSBP6-202ENST00000438529 1198 ntBASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 TFP1-202ENST00000475455 1573 ntBASIC14.39□□□□□ -0.11
TRAV12-3A0A0B4J271 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 BX323043.1-201ENST00000641006 1765 ntBASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 AC073210.2-201ENST00000430369 194 ntBASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 RPS2P52-201ENST00000469610 820 ntBASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 AC092666.2-201ENST00000613287 246 ntBASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV12-3A0A0B4J271 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV12-3A0A0B4J271 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms