Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV8-6A0A0B4J262 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 AL137784.2-201ENST00000607332 1000 ntBASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
TRAV8-6A0A0B4J262 AL390961.4-201ENST00000623958 2535 ntBASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 KRT18P61-201ENST00000585825 1298 ntBASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 AC022517.1-201ENST00000592429 346 ntBASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 AC010536.3-201ENST00000620306 533 ntBASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
TRAV8-6A0A0B4J262 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 AL138781.2-201ENST00000617896 1843 ntBASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 TERF1P5-201ENST00000477545 1207 ntBASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 AC013268.1-206ENST00000638368 961 ntBASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 AC112229.1-201ENST00000639295 961 ntBASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms