Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 AC013268.1-206ENST00000638368 961 ntBASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 AC112229.1-201ENST00000639295 961 ntBASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
TRAV13-1A0A0B4J241 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 NEFHP1-201ENST00000412845 2629 ntBASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV13-1A0A0B4J241 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 PHGDH-210ENST00000641115 1638 ntBASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 MIR638-201ENST00000385237 100 ntBASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 AL162412.1-201ENST00000567129 965 ntBASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 MFSD11-216ENST00000590393 1141 ntBASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV13-1A0A0B4J241 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms