Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC135050.7-201ENST00000624508 2218 ntBASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC005082.1-201ENST00000413042 2259 ntBASIC18.15■□□□□ 0.5
TRBV5-3A0A0A0MS03 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC090164.3-201ENST00000610780 2143 ntBASIC18.14■□□□□ 0.5
TRBV5-3A0A0A0MS03 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC026185.1-201ENST00000445748 174 ntBASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 KRT18P16-201ENST00000510337 1294 ntBASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 AL121906.2-201ENST00000621597 723 ntBASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-3A0A0A0MS03 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 FEM1AP3-201ENST00000403722 1741 ntBASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 IKBKGP1-201ENST00000612193 1073 ntBASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV5-3A0A0A0MS03 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC079598.2-202ENST00000546624 1451 ntBASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 AC007613.1-201ENST00000572811 2597 ntBASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-3A0A0A0MS03 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 GUSBP6-202ENST00000438529 1198 ntBASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.11■□□□□ 0.49
TRBV5-3A0A0A0MS03 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms