Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 AC083906.2-201ENST00000511578 360 ntBASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 IKBKGP1-201ENST00000612193 1073 ntBASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 AC098818.2-201ENST00000564925 2320 ntBASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV30A0A087WSZ9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 DUSP5P2-201ENST00000426873 1033 ntBASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 OR2A1-AS1-201ENST00000462305 773 ntBASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 MIR4758-201ENST00000577688 71 ntBASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 NOC2LP1-202ENST00000452600 2235 ntBASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV30A0A087WSZ9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 CROCCP5-201ENST00000436658 830 ntBASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV30A0A087WSZ9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 LINC01465-201ENST00000408887 1940 ntBASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV30A0A087WSZ9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms