Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PAICSP4-201ENST00000517543 1253 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 COX6CP8-201ENST00000522620 226 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 RPA2P1-201ENST00000556557 721 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC092121.1-201ENST00000569452 202 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC007938.2-201ENST00000604666 2634 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 BCRP9-201ENST00000605312 388 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 NANOGP3-201ENST00000605855 286 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC090948.2-201ENST00000607363 564 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 Z95327.3-201ENST00000610385 572 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AL512624.1-201ENST00000613638 469 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC126175.1-201ENST00000617041 758 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC000123.2-201ENST00000623124 461 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 AC073488.3-201ENST00000631611 778 ntBASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM55Q9BYV6 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 ABCC13-202ENST00000463099 3842 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AL592148.3-201ENST00000608771 2646 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 OR52B3P-201ENST00000314715 928 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 RNA5SP178-201ENST00000410380 128 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 RN7SKP33-201ENST00000410942 340 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 GPS2P1-201ENST00000411761 986 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC104651.1-201ENST00000427559 735 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 HIGD1AP8-201ENST00000453927 274 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 RN7SL273P-201ENST00000481561 299 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 GTF2F2P1-201ENST00000511083 675 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 OR5AP1P-201ENST00000529730 940 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC011477.5-201ENST00000586571 259 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 AC119501.1-201ENST00000603646 475 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 CASC19-221ENST00000641309 1382 ntBASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TRIM55Q9BYV6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 AC235565.1-201ENST00000456962 1325 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 OR11H5P-202ENST00000641612 1325 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 OR11H4-201ENST00000315409 1082 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 MIR323A-201ENST00000362199 86 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 Y_RNA.6-201ENST00000362350 114 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 RNA5SP242-201ENST00000364171 118 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 RNU6-769P-201ENST00000384407 104 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 RNU6-297P-201ENST00000384636 107 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 SNORA40.3-201ENST00000390964 122 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 AL031679.1-201ENST00000400616 525 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 RSU1P2-202ENST00000437884 485 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 USP9YP12-201ENST00000450481 570 ntBASIC5.76□□□□□ -1.49
TRIM55Q9BYV6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms