Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CAPN3P20807 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CAPN3P20807 THAP12P4-201ENST00000528321 2266 ntBASIC4.7□□□□□ -1.66
CAPN3P20807 AL645568.2-201ENST00000432815 1337 ntBASIC4.7□□□□□ -1.66
CAPN3P20807 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.7□□□□□ -1.66
CAPN3P20807 ECM1P2-201ENST00000503354 1577 ntBASIC4.7□□□□□ -1.66
CAPN3P20807 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CAPN3P20807 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 AC107068.1-201ENST00000563286 4218 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.69□□□□□ -1.66
CAPN3P20807 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 RNU6-1226P-201ENST00000384317 107 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 SNORD116-23-201ENST00000384645 92 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AL355379.1-201ENST00000405542 640 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 ZNF602P-201ENST00000405929 924 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 MTND4P22-201ENST00000413116 1169 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 E2F6P2-201ENST00000420708 748 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC009237.2-201ENST00000421358 284 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.69□□□□□ -1.66
CAPN3P20807 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 DNAJC19P7-201ENST00000428811 344 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.69□□□□□ -1.66
CAPN3P20807 GTF2IP3-201ENST00000433887 494 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 HMGB3P6-201ENST00000444896 598 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 TDGF1P1-201ENST00000445734 527 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 HMGB1P16-201ENST00000447155 540 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC010301.1-201ENST00000473936 355 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 RPL7P16-201ENST00000479738 738 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC108145.1-201ENST00000503770 153 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC004980.4-201ENST00000513375 203 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC110775.1-201ENST00000513721 462 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 RNA5SP360-201ENST00000516555 118 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 RNU6-885P-201ENST00000516607 104 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 RNU4-60P-201ENST00000517239 135 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC021451.1-201ENST00000523498 1129 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
CAPN3P20807 OR4A45P-201ENST00000529954 901 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC122134.1-202ENST00000569111 1201 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC105254.2-201ENST00000603636 436 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AC087783.2-201ENST00000605070 562 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 AL513477.2-201ENST00000607858 568 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 SNORD91B-202ENST00000608459 222 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 AC104985.3-201ENST00000623479 597 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 AC026634.1-201ENST00000634369 198 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 MFSD8-245ENST00000641743 948 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.69□□□□□ -1.66
CAPN3P20807 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CAPN3P20807 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CAPN3P20807 Z99496.1-201ENST00000469424 1477 ntBASIC4.69□□□□□ -1.66
CAPN3P20807 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CAPN3P20807 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.68□□□□□ -1.66
CAPN3P20807 AL592148.3-201ENST00000608771 2646 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.68□□□□□ -1.66
CAPN3P20807 RN7SKP149-201ENST00000363008 344 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 RNA5SP123-201ENST00000363244 119 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 RNVU1-6-201ENST00000364688 164 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CAPN3P20807 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CAPN3P20807 SNORD96B-201ENST00000386148 79 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 AL023807.1-201ENST00000407932 359 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 RN7SKP126-201ENST00000411143 300 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 AL133384.1-201ENST00000412744 351 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CAPN3P20807 MTCYBP24-201ENST00000420387 1106 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 FABP7P1-201ENST00000424004 391 ntBASIC4.68□□□□□ -1.66
CAPN3P20807 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms