Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 RACGAP1P-201ENST00000550663 1879 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 AL139276.1-201ENST00000311910 1001 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 HSPE1P11-201ENST00000339579 310 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 Y_RNA.5-201ENST00000362334 102 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 RNU6-1115P-201ENST00000362490 106 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 SNORA62.1-201ENST00000364287 154 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 RNA5SP433-201ENST00000364491 114 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 Y_RNA.364-201ENST00000365532 101 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 SET-203ENST00000372688 801 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 RNU6-39P-201ENST00000384344 107 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 Y_RNA.556-201ENST00000384677 113 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 Y_RNA.574-201ENST00000384766 95 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 RNA5SP431-201ENST00000410312 120 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 NME1P1-201ENST00000420914 382 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC018865.2-201ENST00000423631 129 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 AC079807.1-201ENST00000429993 481 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 DEFA11P-201ENST00000446470 261 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 RN7SL254P-201ENST00000460609 284 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AL049714.1-201ENST00000466686 347 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC128716.1-201ENST00000475129 166 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 RPS27P27-201ENST00000498779 255 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC018645.1-201ENST00000505003 109 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 PRMT5P1-201ENST00000514351 598 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 RN7SKP96-201ENST00000516948 297 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 RNA5SP454-201ENST00000517231 127 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC011979.2-201ENST00000527568 352 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 AC103843.2-201ENST00000530523 682 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 HMGB1P42-201ENST00000532126 553 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.13□□□□□ -1.27
HOXA2O43364 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.13□□□□□ -1.27
HOXA2O43364 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 AF038458.1-201ENST00000588406 262 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 AC011921.2-201ENST00000589465 152 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.13□□□□□ -1.27
HOXA2O43364 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 uc_338.11-201ENST00000619132 160 ntBASIC7.13□□□□□ -1.27
HOXA2O43364 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.13□□□□□ -1.27
HOXA2O43364 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7.13□□□□□ -1.27
HOXA2O43364 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 MFF-206ENST00000392059 1710 ntTSL 5 BASIC7.13□□□□□ -1.27
HOXA2O43364 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
HOXA2O43364 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 AL021877.2-201ENST00000624442 10684 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
HOXA2O43364 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
HOXA2O43364 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXA2O43364 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 Y_RNA.22-201ENST00000362492 102 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 RNU6-379P-201ENST00000363813 104 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
HOXA2O43364 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.12□□□□□ -1.27
HOXA2O43364 MIR649-201ENST00000384843 97 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 MIR558-201ENST00000384920 94 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 SSXP10-201ENST00000402595 565 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms