Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AL445687.2-201ENST00000458156 728 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 RPS29P15-201ENST00000458329 171 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AC092349.1-201ENST00000504903 310 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AC092436.1-201ENST00000506450 503 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 MTND4P7-201ENST00000523876 130 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AL133399.1-201ENST00000527476 298 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AC135001.1-201ENST00000544546 283 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 MIR212-201ENST00000586026 110 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AL138960.1-201ENST00000613838 513 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 U2.14-201ENST00000615943 113 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 AC068213.1-201ENST00000625124 226 ntBASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.62□□□□□ -1.03
TRIM35Q9UPQ4 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 LPAL2-203ENST00000454031 2498 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 DDX18P4-201ENST00000511690 1966 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 RNY4P16-201ENST00000364768 94 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 HMGB1P17-201ENST00000403495 628 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 MYL8P-204ENST00000431574 518 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC004383.1-201ENST00000438135 289 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC099799.1-201ENST00000439809 192 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AL356121.1-201ENST00000442911 156 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 RN7SL393P-201ENST00000463588 296 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AL049714.1-201ENST00000466686 347 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC022415.1-202ENST00000486612 523 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC018645.1-201ENST00000505003 109 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC083906.1-201ENST00000509298 406 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 HSD3BP3-201ENST00000514706 994 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 Y_RNA.683-201ENST00000516508 93 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC116917.1-201ENST00000520558 305 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC092718.4-201ENST00000566639 716 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC105224.1-201ENST00000587055 421 ntBASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
TRIM35Q9UPQ4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC108751.5-201ENST00000492880 1336 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 RNU6-806P-201ENST00000365147 105 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 U3.25-201ENST00000391209 220 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 Y_RNA.594-201ENST00000410373 140 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AL596448.1-201ENST00000415024 392 ntBASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
TRIM35Q9UPQ4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms