Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RNU6-216P-201ENST00000363282 104 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 Y_RNA.192-201ENST00000363977 102 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 SSXP10-201ENST00000402595 565 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AL513325.1-201ENST00000417716 1034 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AL139148.1-201ENST00000427122 680 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 CEACAMP9-201ENST00000442990 513 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 MTCO1P48-201ENST00000448024 1096 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC104634.1-201ENST00000452720 462 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AL133477.1-201ENST00000457472 514 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 USP9YP25-201ENST00000457708 443 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC106872.4-201ENST00000510050 523 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC109445.1-201ENST00000512356 383 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC016065.2-201ENST00000514530 444 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 RN7SKP234-201ENST00000517173 224 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 ZNF705CP-201ENST00000530515 889 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 HIGD1AP17-201ENST00000554576 276 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC007566.2-201ENST00000603642 413 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC108359.1-201ENST00000616451 1211 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AC021755.4-201ENST00000616620 456 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 MIR6837-201ENST00000620884 64 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AL023881.1-201ENST00000621088 301 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 MIR4278-201ENST00000636094 69 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AL049767.1-202ENST00000637826 242 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 ZNF876P-202ENST00000398732 1485 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 CDR1-202ENST00000625883 1485 ntBASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
PCDHB16Q9NRJ7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RNU5D-1-201ENST00000363299 116 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RNA5SP132-201ENST00000364725 118 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RNU6-1226P-201ENST00000384317 107 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RNU1-149P-201ENST00000390870 161 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 GLULP6-201ENST00000399502 913 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 NUDT19P3-201ENST00000404698 555 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AC009237.10-201ENST00000414112 510 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AL050321.1-201ENST00000432363 400 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 MTND2P20-201ENST00000440805 661 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 ARL4AP3-201ENST00000441452 574 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AL591719.1-201ENST00000444669 744 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 MTCYBP11-201ENST00000447254 1109 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 BX276092.4-201ENST00000452056 248 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RPL21P134-201ENST00000453468 483 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 TRBV26-201ENST00000456572 344 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RN7SL443P-201ENST00000464331 290 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 OR2AO1P-201ENST00000476497 403 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 RPL21P103-201ENST00000479921 488 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AC079841.1-201ENST00000481228 950 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 AC013828.1-201ENST00000481845 158 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 MTND2P14-201ENST00000482139 351 ntBASIC4.39□□□□□ -1.71
PCDHB16Q9NRJ7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms