Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AL645931.1-201ENST00000439737 410 ntBASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AP001992.1-205ENST00000462248 379 ntBASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 MTND6P33-201ENST00000571794 183 ntBASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 MIR5680-201ENST00000577577 84 ntBASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AL359757.2-201ENST00000624309 274 ntBASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNAPC4Q5SXM2 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
SNAPC4Q5SXM2 BX323014.1-201ENST00000412876 237 ntBASIC5.96□□□□□ -1.45
SNAPC4Q5SXM2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNAPC4Q5SXM2 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC5.96□□□□□ -1.45
SNAPC4Q5SXM2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.96□□□□□ -1.45
SNAPC4Q5SXM2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.96□□□□□ -1.45
SNAPC4Q5SXM2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNAPC4Q5SXM2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 SNORA80A-201ENST00000363922 136 ntBASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.96□□□□□ -1.46
SNAPC4Q5SXM2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 DDX18P4-201ENST00000511690 1966 ntBASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 RNA5SP146-201ENST00000410743 123 ntBASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 RPS15AP29-201ENST00000445539 400 ntBASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 AC108941.1-201ENST00000502853 530 ntBASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 PPBPP1-201ENST00000510807 373 ntBASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 AC069209.1-201ENST00000619282 651 ntBASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC5.95□□□□□ -1.46
SNAPC4Q5SXM2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 GSTM3P2-201ENST00000412746 530 ntBASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 OR51A6P-201ENST00000418680 1004 ntBASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 AC008065.1-201ENST00000428525 348 ntBASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 BNIP3P41-202ENST00000616656 861 ntBASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNAPC4Q5SXM2 HCFC2P1-201ENST00000392864 1592 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 CCRL1P1-201ENST00000449542 1053 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 S100A11P2-201ENST00000467589 312 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AC011825.1-201ENST00000484967 388 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 RPL21P13-201ENST00000488305 481 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AC006445.1-201ENST00000491925 405 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 RNA5SP341-201ENST00000516261 117 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AL451007.1-201ENST00000595491 289 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AL390816.3-201ENST00000604527 1066 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 AC124312.4-201ENST00000605533 310 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 MIR7851-201ENST00000610611 160 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 ZNF807-201ENST00000328088 1707 ntBASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SNAPC4Q5SXM2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms