Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC007656.2-201ENST00000624902 4547 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
SSBP1Q04837 RN7SKP44-201ENST00000363602 316 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 RNA5SP505-201ENST00000364748 108 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 AL034379.1-201ENST00000423216 253 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 AL645931.1-201ENST00000439737 410 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.01□□□□□ -1.93
SSBP1Q04837 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.01□□□□□ -1.93
SSBP1Q04837 AC021733.2-201ENST00000518830 497 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 MED28P5-201ENST00000528254 438 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 TRAV37-201ENST00000553906 342 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.01□□□□□ -1.93
SSBP1Q04837 AC037471.2-201ENST00000564941 598 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.01□□□□□ -1.93
SSBP1Q04837 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSBP1Q04837 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
SSBP1Q04837 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3□□□□□ -1.93
SSBP1Q04837 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 SNORD56.3-201ENST00000363507 71 ntBASIC3□□□□□ -1.93
SSBP1Q04837 RNA5SP130-201ENST00000364431 114 ntBASIC3□□□□□ -1.93
SSBP1Q04837 SOD2P1-201ENST00000396543 562 ntBASIC3□□□□□ -1.93
SSBP1Q04837 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3□□□□□ -1.93
SSBP1Q04837 AL450992.3-201ENST00000413192 568 ntBASIC3□□□□□ -1.93
SSBP1Q04837 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC3□□□□□ -1.93
SSBP1Q04837 RANP7-201ENST00000418085 644 ntBASIC3□□□□□ -1.93
SSBP1Q04837 PTP4A1P5-201ENST00000420305 455 ntBASIC3□□□□□ -1.93
SSBP1Q04837 COX6CP17-201ENST00000421389 185 ntBASIC3□□□□□ -1.93
SSBP1Q04837 RPS20P1-201ENST00000434853 354 ntBASIC3□□□□□ -1.93
SSBP1Q04837 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3□□□□□ -1.93
SSBP1Q04837 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3□□□□□ -1.93
SSBP1Q04837 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3□□□□□ -1.93
SSBP1Q04837 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3□□□□□ -1.93
SSBP1Q04837 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3□□□□□ -1.93
SSBP1Q04837 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3□□□□□ -1.93
SSBP1Q04837 AC015726.1-201ENST00000602353 681 ntBASIC3□□□□□ -1.93
SSBP1Q04837 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3□□□□□ -1.93
SSBP1Q04837 AC024560.2-201ENST00000507981 1497 ntBASIC3□□□□□ -1.93
SSBP1Q04837 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3□□□□□ -1.93
SSBP1Q04837 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
SSBP1Q04837 AC139713.2-214ENST00000642059 1811 ntBASIC3□□□□□ -1.93
SSBP1Q04837 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3□□□□□ -1.93
SSBP1Q04837 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AC107027.3-201ENST00000565095 3473 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 MTND5P27-201ENST00000428871 1720 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.99□□□□□ -1.93
SSBP1Q04837 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SSBP1Q04837 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SSBP1Q04837 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP1Q04837 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP1Q04837 RNU6-328P-201ENST00000390887 106 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 AC136624.1-201ENST00000400791 413 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 OR8G2P-201ENST00000412796 908 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AL732292.1-201ENST00000426692 226 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 FTH1P1-201ENST00000437933 532 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AL049830.2-201ENST00000480072 201 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 IGKV2-23-201ENST00000518729 323 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 AC245166.1-201ENST00000521012 253 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC2.99□□□□□ -1.93
SSBP1Q04837 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.99□□□□□ -1.93
SSBP1Q04837 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC2.99□□□□□ -1.93
SSBP1Q04837 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.99□□□□□ -1.93
SSBP1Q04837 MIR7703-201ENST00000620784 77 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SSBP1Q04837 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP1Q04837 AC092111.2-201ENST00000611627 1414 ntBASIC2.99□□□□□ -1.93
SSBP1Q04837 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.99□□□□□ -1.93
SSBP1Q04837 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SSBP1Q04837 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC2.99□□□□□ -1.93
SSBP1Q04837 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSBP1Q04837 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.98□□□□□ -1.93
SSBP1Q04837 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC2.98□□□□□ -1.93
SSBP1Q04837 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms