Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 AL024507.1-201ENST00000412741 274 ntBASIC1.62□□□□□ -2.15
USH2AO75445 MTCO1P39-201ENST00000426148 480 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC239809.1-201ENST00000450470 217 ntBASIC1.62□□□□□ -2.15
USH2AO75445 RPL7P47-201ENST00000497299 556 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC018692.3-201ENST00000623929 123 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AP002001.2-201ENST00000529025 1469 ntBASIC1.62□□□□□ -2.15
USH2AO75445 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 CPD-202ENST00000543464 4007 ntTSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
USH2AO75445 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 Y_RNA.540-201ENST00000384638 111 ntBASIC1.62□□□□□ -2.15
USH2AO75445 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 GNG5P5-201ENST00000420444 220 ntBASIC1.62□□□□□ -2.15
USH2AO75445 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 BX276092.3-201ENST00000424182 230 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC1.62□□□□□ -2.15
USH2AO75445 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 LSM1P2-201ENST00000604911 322 ntBASIC1.62□□□□□ -2.15
USH2AO75445 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 MAPK10-253ENST00000641010 4072 ntBASIC1.62□□□□□ -2.15
USH2AO75445 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC1.62□□□□□ -2.15
USH2AO75445 AC011755.1-201ENST00000623763 2049 ntBASIC1.62□□□□□ -2.15
USH2AO75445 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 HSPA8P19-201ENST00000505359 1517 ntBASIC1.62□□□□□ -2.15
USH2AO75445 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 S100A11P1-201ENST00000477525 312 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AC055855.1-201ENST00000489563 579 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC1.62□□□□□ -2.15
USH2AO75445 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 COX6CP4-201ENST00000605798 228 ntBASIC1.62□□□□□ -2.15
USH2AO75445 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
USH2AO75445 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
USH2AO75445 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 DMD-228ENST00000541735 7080 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 SNORA9.2-201ENST00000365361 133 ntBASIC1.61□□□□□ -2.15
USH2AO75445 MIR1289-2-201ENST00000408360 111 ntBASIC1.61□□□□□ -2.15
USH2AO75445 LSM5-206ENST00000409987 504 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AC010740.1-201ENST00000417035 684 ntBASIC1.61□□□□□ -2.15
USH2AO75445 HSPE1P27-201ENST00000430808 296 ntBASIC1.61□□□□□ -2.15
USH2AO75445 HMGB1P37-201ENST00000439613 609 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AC124916.1-201ENST00000444020 547 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 AC008837.1-201ENST00000511513 412 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AC017037.2-201ENST00000513850 890 ntBASIC1.61□□□□□ -2.15
USH2AO75445 RNU7-143P-201ENST00000516781 65 ntBASIC1.61□□□□□ -2.15
USH2AO75445 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 AC018442.3-201ENST00000523025 183 ntBASIC1.61□□□□□ -2.15
USH2AO75445 OR5M7P-201ENST00000526140 972 ntBASIC1.61□□□□□ -2.15
USH2AO75445 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AL121594.4-201ENST00000556211 1196 ntBASIC1.61□□□□□ -2.15
USH2AO75445 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AC020656.2-201ENST00000613291 5309 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms