Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RNU6-289P-201ENST00000364093 107 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RPA3-203ENST00000401447 414 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RN7SKP240-201ENST00000410583 375 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 MYL6P5-201ENST00000412707 459 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RPL7AP14-201ENST00000424041 802 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 DYNLL1P7-201ENST00000429273 258 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 TAAR7P-201ENST00000436141 242 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RPS12P17-201ENST00000438591 377 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RBMY2TP-201ENST00000451162 947 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 FRG2FP-204ENST00000453982 852 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RPL12P39-201ENST00000455456 496 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RPL38P3-201ENST00000484463 213 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC090958.1-201ENST00000511122 351 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC243972.3-201ENST00000539655 198 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC124916.2-201ENST00000604416 224 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC022400.9-201ENST00000623633 273 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AP000550.3-201ENST00000637734 379 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC004076.2-201ENST00000620532 3323 ntBASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SALL4Q9UJQ4 AC104966.1-201ENST00000467010 1464 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 Y_RNA.431-201ENST00000384086 102 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 MRPL42P2-201ENST00000403169 426 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC127391.1-201ENST00000411737 98 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AL035422.1-201ENST00000414193 397 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AL353193.1-201ENST00000421444 268 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 HMGB3P9-201ENST00000441799 583 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 HMGN1P2-201ENST00000445197 310 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 RPL23AP12-201ENST00000467573 473 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 ZNF519P4-201ENST00000514008 125 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 AC093027.1-201ENST00000546698 429 ntBASIC6.34□□□□□ -1.39
SALL4Q9UJQ4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms