Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC100778.3-201ENST00000580060 1750 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC103591.2-201ENST00000265259 766 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 RNU6-249P-201ENST00000363016 102 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 RNA5SP428-201ENST00000365129 132 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 Y_RNA.318-201ENST00000365131 97 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL139128.1-201ENST00000413921 941 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL022400.1-201ENST00000423946 935 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 PRPF38AP2-201ENST00000438179 851 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC118469.1-201ENST00000442943 488 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 NPM1P39-201ENST00000449818 867 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 HIGD1AP8-201ENST00000453927 274 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 RPL31P3-201ENST00000458430 332 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 RPS23P1-201ENST00000491662 432 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC010350.1-201ENST00000504908 231 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 RN7SKP31-201ENST00000516354 278 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 OR5D15P-201ENST00000531671 942 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 NMNAT1P1-201ENST00000554095 876 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL049539.1-201ENST00000611964 459 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC004223.4-201ENST00000612426 332 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC091931.1-201ENST00000623488 728 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC073530.2-201ENST00000623987 261 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AP001784.1-201ENST00000624107 428 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC021755.1-201ENST00000559747 1447 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AL022393.1-201ENST00000625142 1677 ntBASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CDCP1Q9H5V8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 AC087359.1-201ENST00000508335 1740 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 AC010329.2-201ENST00000595195 2737 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 AP001642.1-201ENST00000624727 2117 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 CASC19-221ENST00000641309 1382 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 RN7SKP95-201ENST00000362860 303 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 UBBP2-201ENST00000376781 231 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 SNORA2.3-201ENST00000383920 135 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 RNU6-1200P-201ENST00000384162 107 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 SNORA48.4-201ENST00000391089 134 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 Z97832.1-201ENST00000402490 328 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 AL390316.1-201ENST00000406279 553 ntBASIC4.69□□□□□ -1.66
CDCP1Q9H5V8 RPL12P9-201ENST00000412942 488 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms