Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC069306.1-201ENST00000507006 843 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 AC017037.1-201ENST00000508460 471 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 UBE2NP1-201ENST00000545592 458 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 LARP7P3-201ENST00000579888 337 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 RN7SL853P-201ENST00000617250 223 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 AC026422.1-201ENST00000623961 452 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.03□□□□□ -1.44
TOPBP1Q92547 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOPBP1Q92547 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOPBP1Q92547 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
TOPBP1Q92547 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TOPBP1Q92547 SNORA80A-201ENST00000363922 136 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 LIPT1P1-201ENST00000415870 1186 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 AL691447.1-201ENST00000419456 387 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 BX842559.1-201ENST00000419615 532 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.02□□□□□ -1.45
TOPBP1Q92547 HLA-N-201ENST00000437516 135 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOPBP1Q92547 UBA52P3-201ENST00000491303 382 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOPBP1Q92547 STMN1P2-201ENST00000508435 439 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.02□□□□□ -1.45
TOPBP1Q92547 CKS1BP3-201ENST00000600888 237 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.02□□□□□ -1.45
TOPBP1Q92547 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
TOPBP1Q92547 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
TOPBP1Q92547 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
TOPBP1Q92547 MAPK10-253ENST00000641010 4072 ntBASIC6.02□□□□□ -1.45
TOPBP1Q92547 AC004944.1-201ENST00000517807 3059 ntBASIC6.01□□□□□ -1.45
TOPBP1Q92547 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 TAF9BP1-201ENST00000396646 746 ntBASIC6.01□□□□□ -1.45
TOPBP1Q92547 RN7SKP53-201ENST00000411337 315 ntBASIC6.01□□□□□ -1.45
TOPBP1Q92547 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 AC116312.1-201ENST00000606841 314 ntBASIC6.01□□□□□ -1.45
TOPBP1Q92547 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOPBP1Q92547 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
TOPBP1Q92547 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOPBP1Q92547 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
TOPBP1Q92547 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
TOPBP1Q92547 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOPBP1Q92547 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6□□□□□ -1.45
TOPBP1Q92547 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6□□□□□ -1.45
TOPBP1Q92547 HMGB3P20-201ENST00000417997 600 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 OR1AA1P-201ENST00000419597 916 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6□□□□□ -1.45
TOPBP1Q92547 NANOGNBP1-201ENST00000448444 480 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 AC010655.1-201ENST00000449336 292 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 RPL27AP5-201ENST00000469428 449 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6□□□□□ -1.45
TOPBP1Q92547 RNA5SP341-201ENST00000516261 117 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 RNU4ATAC17P-201ENST00000517272 120 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
TOPBP1Q92547 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC6□□□□□ -1.45
TOPBP1Q92547 CYP4A43P-201ENST00000568156 121 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 AC107294.1-201ENST00000609524 467 ntBASIC6□□□□□ -1.45
TOPBP1Q92547 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TOPBP1Q92547 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC6□□□□□ -1.45
TOPBP1Q92547 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
TOPBP1Q92547 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6□□□□□ -1.45
TOPBP1Q92547 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
TOPBP1Q92547 AC003985.2-201ENST00000562268 1669 ntBASIC5.99□□□□□ -1.45
TOPBP1Q92547 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TOPBP1Q92547 GSTA8P-201ENST00000404253 637 ntBASIC5.99□□□□□ -1.45
TOPBP1Q92547 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 FTH1P24-201ENST00000503502 462 ntBASIC5.99□□□□□ -1.45
TOPBP1Q92547 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.99□□□□□ -1.45
TOPBP1Q92547 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 AC005008.1-201ENST00000456151 612 ntBASIC5.99□□□□□ -1.45
TOPBP1Q92547 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 NPM1P28-201ENST00000492269 840 ntBASIC5.99□□□□□ -1.45
TOPBP1Q92547 RPL5P23-201ENST00000496040 868 ntBASIC5.99□□□□□ -1.45
TOPBP1Q92547 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.99□□□□□ -1.45
TOPBP1Q92547 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms