Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC019050.1-201ENST00000418508 492 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 RPS6P15-201ENST00000431996 751 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 SEPT7P5-201ENST00000434048 306 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC092393.1-201ENST00000439625 742 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC093155.1-201ENST00000440164 826 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC239809.1-201ENST00000450470 217 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 RPL5P24-201ENST00000463742 885 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC108734.3-201ENST00000481241 1165 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC011352.3-201ENST00000505162 593 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC119751.5-201ENST00000514077 770 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 RNA5SP43-201ENST00000516559 110 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AP001207.1-201ENST00000524051 481 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 GCSHP4-201ENST00000538792 439 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC010198.2-201ENST00000550612 259 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 ZNF321P-202ENST00000550843 495 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC087465.1-201ENST00000560574 245 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AL354943.1-201ENST00000572103 781 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC017100.2-201ENST00000584628 355 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC008687.2-201ENST00000597865 520 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC008745.1-201ENST00000604064 271 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC080013.3-201ENST00000606839 578 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 AC017037.3-201ENST00000625016 472 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 Z99496.1-201ENST00000469424 1477 ntBASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC33Q8N5R6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 RN7SKP113-201ENST00000363891 295 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 UBBP2-201ENST00000376781 231 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AL512430.2-201ENST00000406786 339 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 RN7SKP247-201ENST00000411094 308 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 NRBF2P2-201ENST00000413087 861 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 PRELID3BP11-201ENST00000414230 479 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AL590139.1-201ENST00000416267 400 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC013429.2-201ENST00000418798 781 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 MRPS36P1-201ENST00000421291 307 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AL031736.2-201ENST00000426573 787 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 USP9YP11-201ENST00000427537 717 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 COX6CP13-201ENST00000428703 226 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 RPL37P1-201ENST00000432310 284 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 RPL21P133-201ENST00000443666 476 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 RPL23AP15-201ENST00000450202 459 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 Z99714.1-201ENST00000450463 807 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 OR52J1P-201ENST00000450596 932 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 NDUFA12P1-201ENST00000455914 406 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 NF1P3-201ENST00000457709 450 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AP000563.1-201ENST00000490865 758 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC005351.1-201ENST00000511152 786 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 SNORA3.4-201ENST00000515969 96 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 C1GALT1P3-201ENST00000522049 819 ntBASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.17□□□□□ -1.58
CCDC33Q8N5R6 AC005832.3-201ENST00000537929 631 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms