Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.68□□□□□ -1.82
VCANP13611 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.68□□□□□ -1.82
VCANP13611 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.68□□□□□ -1.82
VCANP13611 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.68□□□□□ -1.82
VCANP13611 AC127024.5-201ENST00000580085 462 ntBASIC3.68□□□□□ -1.82
VCANP13611 RNVU1-4-201ENST00000612985 164 ntBASIC3.68□□□□□ -1.82
VCANP13611 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VCANP13611 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VCANP13611 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
VCANP13611 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VCANP13611 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC3.68□□□□□ -1.82
VCANP13611 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VCANP13611 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VCANP13611 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.68□□□□□ -1.82
VCANP13611 IGKV2-26-201ENST00000518305 343 ntBASIC3.68□□□□□ -1.82
VCANP13611 AC008966.2-201ENST00000606157 453 ntBASIC3.68□□□□□ -1.82
VCANP13611 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
VCANP13611 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
VCANP13611 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 AC010374.2-201ENST00000512933 535 ntBASIC3.67□□□□□ -1.82
VCANP13611 RN7SKP244-201ENST00000516513 307 ntBASIC3.67□□□□□ -1.82
VCANP13611 MIR7851-201ENST00000610611 160 ntBASIC3.67□□□□□ -1.82
VCANP13611 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VCANP13611 AC093535.2-201ENST00000624769 2326 ntBASIC3.67□□□□□ -1.82
VCANP13611 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.67□□□□□ -1.82
VCANP13611 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.67□□□□□ -1.82
VCANP13611 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
VCANP13611 UBE2V2P4-201ENST00000447495 259 ntBASIC3.67□□□□□ -1.82
VCANP13611 AC008885.1-201ENST00000514930 301 ntBASIC3.67□□□□□ -1.82
VCANP13611 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.67□□□□□ -1.82
VCANP13611 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 AC027287.1-201ENST00000553115 1453 ntBASIC3.67□□□□□ -1.82
VCANP13611 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VCANP13611 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.67□□□□□ -1.82
VCANP13611 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 RSL24D1P4-201ENST00000400938 484 ntBASIC3.66□□□□□ -1.82
VCANP13611 AL031736.2-201ENST00000426573 787 ntBASIC3.66□□□□□ -1.82
VCANP13611 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.66□□□□□ -1.82
VCANP13611 AC231759.1-201ENST00000616455 597 ntBASIC3.66□□□□□ -1.82
VCANP13611 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCANP13611 HYDIN2-203ENST00000614586 13885 ntBASIC3.66□□□□□ -1.82
VCANP13611 AL117339.4-201ENST00000608335 7063 ntBASIC3.66□□□□□ -1.82
VCANP13611 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC3.66□□□□□ -1.82
VCANP13611 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 BX276092.3-201ENST00000424182 230 ntBASIC3.66□□□□□ -1.82
VCANP13611 SNRPCP3-201ENST00000474888 476 ntBASIC3.66□□□□□ -1.82
VCANP13611 RPS4XP6-201ENST00000477670 797 ntBASIC3.66□□□□□ -1.82
VCANP13611 RPL7P24-201ENST00000493052 752 ntBASIC3.66□□□□□ -1.82
VCANP13611 EEF1A1P37-201ENST00000522748 715 ntBASIC3.66□□□□□ -1.82
VCANP13611 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC3.66□□□□□ -1.82
VCANP13611 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.66□□□□□ -1.82
VCANP13611 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.66□□□□□ -1.82
VCANP13611 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCANP13611 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.66□□□□□ -1.82
VCANP13611 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC3.66□□□□□ -1.82
VCANP13611 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
VCANP13611 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VCANP13611 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VCANP13611 RNU11-201ENST00000387069 134 ntBASIC3.66□□□□□ -1.82
VCANP13611 BNIP3P8-201ENST00000597863 560 ntBASIC3.66□□□□□ -1.82
VCANP13611 AL360012.1-201ENST00000602813 131 ntBASIC3.66□□□□□ -1.82
VCANP13611 AC015802.5-201ENST00000607478 399 ntBASIC3.66□□□□□ -1.82
VCANP13611 AC006504.1-201ENST00000562493 3666 ntBASIC3.66□□□□□ -1.82
VCANP13611 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VCANP13611 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VCANP13611 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
VCANP13611 AC062016.1-201ENST00000355719 319 ntBASIC3.65□□□□□ -1.82
VCANP13611 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
VCANP13611 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.65□□□□□ -1.82
VCANP13611 GNG5P5-201ENST00000420444 220 ntBASIC3.65□□□□□ -1.82
VCANP13611 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.65□□□□□ -1.82
VCANP13611 AC006028.1-201ENST00000438379 402 ntBASIC3.65□□□□□ -1.82
VCANP13611 AL135938.1-201ENST00000443141 297 ntBASIC3.65□□□□□ -1.82
VCANP13611 RNA5SP445-201ENST00000515889 115 ntBASIC3.65□□□□□ -1.82
VCANP13611 OR5M7P-201ENST00000526140 972 ntBASIC3.65□□□□□ -1.82
VCANP13611 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC3.65□□□□□ -1.82
VCANP13611 AC245100.7-201ENST00000609678 442 ntBASIC3.65□□□□□ -1.82
VCANP13611 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC3.65□□□□□ -1.82
VCANP13611 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
VCANP13611 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC3.65□□□□□ -1.82
VCANP13611 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
VCANP13611 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
VCANP13611 OR2AH1P-201ENST00000425717 928 ntBASIC3.65□□□□□ -1.83
VCANP13611 RPS27AP15-201ENST00000447672 466 ntBASIC3.65□□□□□ -1.83
VCANP13611 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.65□□□□□ -1.83
VCANP13611 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms