Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
PHOX2BQ99453 AC092821.2-201ENST00000545710 2042 ntBASIC7.16□□□□□ -1.26
PHOX2BQ99453 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.16□□□□□ -1.26
PHOX2BQ99453 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PHOX2BQ99453 AC068733.2-201ENST00000605434 1418 ntBASIC7.16□□□□□ -1.26
PHOX2BQ99453 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.16□□□□□ -1.26
PHOX2BQ99453 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
PHOX2BQ99453 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PHOX2BQ99453 MTND5P28-201ENST00000438005 1594 ntBASIC7.16□□□□□ -1.26
PHOX2BQ99453 ZNF519P1-201ENST00000449011 1626 ntBASIC7.16□□□□□ -1.26
PHOX2BQ99453 AL589993.1-201ENST00000407450 2524 ntBASIC7.16□□□□□ -1.26
PHOX2BQ99453 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
PHOX2BQ99453 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PHOX2BQ99453 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PHOX2BQ99453 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PHOX2BQ99453 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PHOX2BQ99453 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC034111.1-201ENST00000562143 3770 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RPL12P13-201ENST00000310055 497 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RNU6-1287P-201ENST00000362914 107 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RNA5SP443-201ENST00000363083 132 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RNA5SP512-201ENST00000364550 120 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RNY1P14-201ENST00000384426 108 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RNU6-1060P-201ENST00000384664 107 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AL356968.1-201ENST00000416622 474 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC244505.2-201ENST00000435089 759 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AL162395.1-201ENST00000457882 422 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC104564.1-201ENST00000493028 407 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RN7SL362P-201ENST00000494228 267 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC008526.1-201ENST00000509149 338 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 RNU6-388P-201ENST00000517012 105 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 RNU6-389P-201ENST00000517048 105 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AL049779.2-201ENST00000553847 315 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 RPL29P33-201ENST00000587474 316 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC005518.2-201ENST00000603254 282 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC025034.2-201ENST00000623264 286 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 AC005514.1-201ENST00000623521 208 ntBASIC7.15□□□□□ -1.26
PHOX2BQ99453 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PHOX2BQ99453 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
PHOX2BQ99453 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
PHOX2BQ99453 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.27
PHOX2BQ99453 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
PHOX2BQ99453 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
PHOX2BQ99453 API5P2-201ENST00000397055 1498 ntBASIC7.15□□□□□ -1.27
PHOX2BQ99453 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.15□□□□□ -1.27
PHOX2BQ99453 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.15□□□□□ -1.27
PHOX2BQ99453 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
PHOX2BQ99453 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
PHOX2BQ99453 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.14□□□□□ -1.27
PHOX2BQ99453 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.14□□□□□ -1.27
PHOX2BQ99453 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
PHOX2BQ99453 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
PHOX2BQ99453 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
PHOX2BQ99453 RNU6-490P-201ENST00000362985 107 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 RNU1-115P-201ENST00000365329 160 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 RNU6-890P-201ENST00000384121 107 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 Y_RNA.552-201ENST00000384665 112 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 AL121835.1-201ENST00000404250 354 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
PHOX2BQ99453 OFD1P1Y-201ENST00000411756 1225 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 PSMA6P3-201ENST00000428242 164 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 CALM2P2-201ENST00000428512 440 ntBASIC7.14□□□□□ -1.27
PHOX2BQ99453 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.14□□□□□ -1.27
PHOX2BQ99453 MED28P3-201ENST00000444288 531 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms