Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TOPBP1Q92547 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TOPBP1Q92547 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TOPBP1Q92547 HSP90AA4P-202ENST00000506915 2228 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 RNF19BPX-201ENST00000426224 625 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.07□□□□□ -1.44
TOPBP1Q92547 SNRPCP3-201ENST00000474888 476 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 TMED11P-201ENST00000479478 690 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.07□□□□□ -1.44
TOPBP1Q92547 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.07□□□□□ -1.44
TOPBP1Q92547 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.07□□□□□ -1.44
TOPBP1Q92547 AC124312.4-201ENST00000605533 310 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.07□□□□□ -1.44
TOPBP1Q92547 UBE3AP2-201ENST00000429033 2259 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.07□□□□□ -1.44
TOPBP1Q92547 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TOPBP1Q92547 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
TOPBP1Q92547 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TOPBP1Q92547 AC083837.1-201ENST00000565297 2994 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 AC093535.2-201ENST00000624769 2326 ntBASIC6.07□□□□□ -1.44
TOPBP1Q92547 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
TOPBP1Q92547 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOPBP1Q92547 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOPBP1Q92547 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
TOPBP1Q92547 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TOPBP1Q92547 BX323014.1-201ENST00000412876 237 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.06□□□□□ -1.44
TOPBP1Q92547 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.06□□□□□ -1.44
TOPBP1Q92547 AC008481.1-201ENST00000463278 396 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 S100A11P2-201ENST00000467589 312 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.06□□□□□ -1.44
TOPBP1Q92547 PRELID3BP6-201ENST00000503839 571 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.06□□□□□ -1.44
TOPBP1Q92547 AC006386.2-201ENST00000624491 75 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 AC012005.1-201ENST00000624575 75 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 AC119674.1-212ENST00000641155 993 ntBASIC6.06□□□□□ -1.44
TOPBP1Q92547 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOPBP1Q92547 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOPBP1Q92547 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOPBP1Q92547 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TOPBP1Q92547 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
TOPBP1Q92547 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 HSPE1P27-201ENST00000430808 296 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 AC011742.1-201ENST00000431448 434 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 KCTD9P3-201ENST00000434597 1169 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 U3.44-201ENST00000458938 192 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 AP001992.1-205ENST00000462248 379 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 AC006445.1-201ENST00000491925 405 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 PTGES3P3-201ENST00000511479 482 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 Vault.1-201ENST00000516474 102 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 AC026979.4-201ENST00000606555 645 ntBASIC6.05□□□□□ -1.44
TOPBP1Q92547 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TOPBP1Q92547 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
TOPBP1Q92547 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TOPBP1Q92547 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.05□□□□□ -1.44
TOPBP1Q92547 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 RN7SKP111-201ENST00000410349 271 ntBASIC6.04□□□□□ -1.44
TOPBP1Q92547 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 SDCBPP2-201ENST00000424643 885 ntBASIC6.04□□□□□ -1.44
TOPBP1Q92547 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 AC023161.2-201ENST00000551218 780 ntBASIC6.04□□□□□ -1.44
TOPBP1Q92547 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
TOPBP1Q92547 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TOPBP1Q92547 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TOPBP1Q92547 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
TOPBP1Q92547 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TOPBP1Q92547 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
TOPBP1Q92547 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.04□□□□□ -1.44
TOPBP1Q92547 AL133247.2-201ENST00000603236 482 ntBASIC6.04□□□□□ -1.44
TOPBP1Q92547 MIR7154-201ENST00000620673 73 ntBASIC6.04□□□□□ -1.44
TOPBP1Q92547 U4.6-201ENST00000621618 127 ntBASIC6.04□□□□□ -1.44
TOPBP1Q92547 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.03□□□□□ -1.44
TOPBP1Q92547 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 LINC01109-201ENST00000603837 3081 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
TOPBP1Q92547 AL357075.1-201ENST00000404107 726 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.03□□□□□ -1.44
TOPBP1Q92547 DYNLL1P7-201ENST00000429273 258 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 RN7SL429P-201ENST00000479090 223 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 AC011825.1-201ENST00000484967 388 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 RN7SL489P-201ENST00000486185 223 ntBASIC6.03□□□□□ -1.44
TOPBP1Q92547 RN7SL327P-201ENST00000488659 223 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms