Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC044860.3-201ENST00000559957 368 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 RN7SL66P-201ENST00000582099 264 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AC012175.1-201ENST00000603755 531 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 SNX29P2-204ENST00000603801 875 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 AC006453.3-201ENST00000635891 377 ntBASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
SCAF1Q9H7N4 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 LRRC37A9P-201ENST00000603850 5376 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 HSPA8P18-201ENST00000439846 1928 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AP001148.1-201ENST00000624124 2359 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 Y_RNA.458-201ENST00000384240 102 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 RNA5SP122-201ENST00000384457 108 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AL035551.1-201ENST00000446931 348 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AC084198.1-201ENST00000477747 402 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 Y_RNA.687-201ENST00000516558 91 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 SCARNA11.1-201ENST00000516918 132 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AC109479.2-201ENST00000517842 174 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 IGKV2D-10-201ENST00000520194 281 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 PSMA6P4-201ENST00000603247 718 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 AC022819.1-201ENST00000563495 3910 ntBASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC11.26□□□□□ -0.61
SCAF1Q9H7N4 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AC019155.1-201ENST00000382242 574 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 RNA5SP178-201ENST00000410380 128 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 Z82198.3-201ENST00000421145 199 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 HCG25-217ENST00000422366 702 ntTSL 3 BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AL645568.3-201ENST00000433683 316 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 RPL23AP19-201ENST00000436229 369 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 TPT1P13-201ENST00000449760 499 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 NUTF2P7-201ENST00000453086 375 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AC021205.1-201ENST00000468797 348 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AC010469.2-201ENST00000496412 480 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 RN7SKP183-201ENST00000517169 324 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AP000435.1-201ENST00000528539 496 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AL049779.2-201ENST00000553847 315 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 RPS28P1-201ENST00000604589 187 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AL358335.3-201ENST00000604678 327 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AL591926.4-201ENST00000616895 298 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AL450226.2-201ENST00000622913 439 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 AC024580.1-201ENST00000623020 674 ntBASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SCAF1Q9H7N4 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 HSPA8P14-201ENST00000552265 1805 ntBASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 RNU6-188P-201ENST00000364207 107 ntBASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 U3.20-201ENST00000390909 217 ntBASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 RPL37P1-201ENST00000432310 284 ntBASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 AC099344.1-201ENST00000433548 492 ntBASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 AL390728.3-201ENST00000452704 270 ntBASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 APOBEC3AP1-201ENST00000511396 287 ntBASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC11.24□□□□□ -0.61
SCAF1Q9H7N4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms