Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 KATNBL1P3-201ENST00000443475 909 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC104306.1-201ENST00000449702 371 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 HMGB1P4-201ENST00000455362 567 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 APOOP2-201ENST00000461561 539 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC112206.1-201ENST00000468416 477 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 GAPDHP39-201ENST00000481866 979 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 RPL7P41-201ENST00000485823 957 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 UBA52P7-201ENST00000486088 380 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 DYNLL1P6-201ENST00000503440 264 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC098799.3-201ENST00000506095 438 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC116353.3-201ENST00000511215 249 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC134698.5-201ENST00000519444 336 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 HIGD1AP17-201ENST00000554576 276 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC135628.1-201ENST00000568867 534 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC087763.1-201ENST00000603391 286 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AL031281.1-201ENST00000604049 488 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 AC116447.1-201ENST00000613153 453 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 AL603755.1-201ENST00000619504 163 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 OR8B1P-202ENST00000641132 1178 ntBASIC4.98□□□□□ -1.61
VPS50Q96JG6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS50Q96JG6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VPS50Q96JG6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC131971.1-201ENST00000332881 1482 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 RNU6-560P-201ENST00000364007 108 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 Y_RNA.318-201ENST00000365131 97 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 Y_RNA.408-201ENST00000383987 102 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 SNORD65.1-201ENST00000390889 71 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 RN7SKP16-201ENST00000410180 299 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 RN7SKP126-201ENST00000411143 300 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 DPPA2P3-201ENST00000411853 655 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC093162.1-201ENST00000419682 124 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 BX119904.4-201ENST00000424402 301 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 CNOT7P1-201ENST00000429006 852 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC005345.1-201ENST00000431868 217 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 ATP5F1P1-201ENST00000433775 569 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 VN1R54P-201ENST00000435210 1049 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 RPL12P46-201ENST00000436610 195 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 RPS7P5-201ENST00000441482 581 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC073648.4-201ENST00000442655 781 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 RN7SL814P-201ENST00000487715 300 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC231760.1-201ENST00000498002 260 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC104090.1-201ENST00000506341 1171 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 IGBP1P5-201ENST00000507524 1000 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AP004607.2-201ENST00000533949 322 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS50Q96JG6 PCNPP1-201ENST00000552501 511 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 EDDM3DP-201ENST00000554692 434 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC018552.3-201ENST00000567416 561 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC006116.3-201ENST00000592968 361 ntBASIC4.97□□□□□ -1.61
VPS50Q96JG6 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS50Q96JG6 AL158042.1-201ENST00000605338 460 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms