Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RN7SL558P-201ENST00000497468 299 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 RNA5SP249-201ENST00000516127 99 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 RNU1-6P-201ENST00000516290 144 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 HMGB1P19-201ENST00000517578 577 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 OR4A2P-201ENST00000527276 913 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 PARP1P2-201ENST00000556806 195 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC116553.2-201ENST00000564203 463 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 RPL12P25-202ENST00000598100 674 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 DEFB131E-202ENST00000602581 683 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC073091.2-201ENST00000603205 907 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL121873.1-201ENST00000616013 524 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC104985.3-201ENST00000623479 597 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL596275.2-204ENST00000641628 552 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 AL596275.2-206ENST00000641957 626 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 UGT2B26P-201ENST00000508672 1613 ntBASIC4.92□□□□□ -1.62
EBF3Q9H4W6 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
EBF3Q9H4W6 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC008079.2-201ENST00000623543 20396 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC005261.4-201ENST00000600047 1385 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 SNORA70.2-201ENST00000364506 135 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 MIR129-1-201ENST00000384972 72 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AL356967.1-201ENST00000406305 431 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 RNU2-17P-201ENST00000410290 190 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 RNA5SP296-201ENST00000410523 111 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 RPEP3-201ENST00000425462 676 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 RPS3AP44-201ENST00000425466 790 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC108751.2-201ENST00000469993 231 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC090686.1-201ENST00000481577 749 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC117532.1-201ENST00000514638 323 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 IGKV2D-10-201ENST00000520194 281 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC004987.4-201ENST00000603383 338 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC121247.2-201ENST00000604776 136 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AC090246.1-201ENST00000616499 426 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 MTND5P23-201ENST00000430812 1655 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
EBF3Q9H4W6 MTND4P26-201ENST00000415971 1359 ntBASIC4.91□□□□□ -1.62
EBF3Q9H4W6 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 SGO1P1-201ENST00000603525 1447 ntBASIC4.9□□□□□ -1.62
EBF3Q9H4W6 Z95327.2-201ENST00000414579 1873 ntBASIC4.9□□□□□ -1.62
EBF3Q9H4W6 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
EBF3Q9H4W6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms