Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC098869.1-201ENST00000481627 292 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC026979.1-201ENST00000492525 396 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC116562.3-201ENST00000506136 177 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 DCAF13P2-201ENST00000514188 555 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC068587.5-201ENST00000528506 175 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 PPIAP6-201ENST00000557078 499 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 NPM1P42-201ENST00000560329 862 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 SNORD91A-202ENST00000609620 191 ntBASIC7.6□□□□□ -1.19
VARS2Q5ST30 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 TMEM267-202ENST00000500337 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
VARS2Q5ST30 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
VARS2Q5ST30 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 HSPA8P1-201ENST00000425843 1833 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 Y_RNA.183-201ENST00000363882 113 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 RNA5SP205-201ENST00000364653 136 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 RNU6-1303P-201ENST00000364841 107 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AL583834.1-201ENST00000406943 343 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC068138.1-201ENST00000412635 217 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 RPS24P8-201ENST00000431490 402 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC093156.1-201ENST00000440382 670 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 AL845321.1-201ENST00000444603 348 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC002381.1-201ENST00000447049 280 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC011225.1-201ENST00000457751 369 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 BX323845.2-201ENST00000458382 234 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 RPS15AP17-201ENST00000470598 390 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 RN7SL88P-201ENST00000480166 299 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 PDCD5P2-201ENST00000507570 312 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC097486.1-201ENST00000515331 210 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 DEFB108E-201ENST00000524692 240 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 MIR4428-201ENST00000584884 73 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 RPS27AP19-201ENST00000597285 458 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AL078605.1-201ENST00000603529 500 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC020910.3-201ENST00000603701 874 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 RN7SL126P-201ENST00000616400 299 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
VARS2Q5ST30 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 Z99129.4-201ENST00000624649 2435 ntBASIC7.59□□□□□ -1.19
VARS2Q5ST30 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.59□□□□□ -1.19
VARS2Q5ST30 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.2
VARS2Q5ST30 AC011008.2-201ENST00000624866 3352 ntBASIC7.59□□□□□ -1.2
VARS2Q5ST30 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
VARS2Q5ST30 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.2
VARS2Q5ST30 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.2
VARS2Q5ST30 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC244517.1-201ENST00000606030 2086 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 AC003973.3-201ENST00000624863 2822 ntBASIC7.58□□□□□ -1.2
VARS2Q5ST30 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
VARS2Q5ST30 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
VARS2Q5ST30 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms