Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC006511.1-201ENST00000470614 315 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL161747.1-201ENST00000480068 358 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 MIR3912-201ENST00000577566 105 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC090312.2-201ENST00000582687 378 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 MRPS35P3-201ENST00000603189 709 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC087763.1-201ENST00000603391 286 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AL355816.1-201ENST00000607951 118 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 AC105227.2-201ENST00000615075 605 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 MIR1322-201ENST00000638013 71 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 NEAT1-202ENST00000501122 22743 ntBASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CDK5RAP3Q96JB5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AP005901.5-201ENST00000545779 1796 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 Y_RNA.169-201ENST00000363745 96 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 Y_RNA.465-201ENST00000384293 102 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 DPPA2P3-201ENST00000411853 655 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AL365338.1-201ENST00000422282 858 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 PRPF38AP2-201ENST00000438179 851 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AL008629.1-201ENST00000438615 184 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 GEMIN8P3-201ENST00000445417 720 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 YWHAQP9-201ENST00000445891 512 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC239809.1-201ENST00000450470 217 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC011979.1-201ENST00000472300 483 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 RN7SL97P-201ENST00000486780 299 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 OR5M14P-201ENST00000506803 618 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 Y_RNA.719-201ENST00000517156 106 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 IGKV2-36-201ENST00000519999 223 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AP000926.4-201ENST00000527351 454 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 OR7E18P-201ENST00000592589 702 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC107075.1-201ENST00000613695 314 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC131159.1-201ENST00000621854 213 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AC016717.3-201ENST00000624730 554 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 AL353662.3-201ENST00000625131 237 ntBASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.53□□□□□ -1.52
CDK5RAP3Q96JB5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.52□□□□□ -1.52
CDK5RAP3Q96JB5 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 DDX18P3-201ENST00000404856 2007 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC046144.1-201ENST00000478559 1853 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC019050.1-201ENST00000418508 492 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 MTND2P18-201ENST00000419962 1030 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 RPL12P34-201ENST00000424532 479 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 AC073143.1-201ENST00000436316 395 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 HMGB3P9-201ENST00000441799 583 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 HMGB1P16-201ENST00000447155 540 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 ATG12P2-201ENST00000456830 416 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 RN7SL517P-201ENST00000462240 305 ntBASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
CDK5RAP3Q96JB5 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms