Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC020633.1-201ENST00000468439 2247 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC005225.5-201ENST00000623547 2225 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 MIR606-201ENST00000384851 96 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AL136131.1-201ENST00000406079 803 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AL353193.1-201ENST00000421444 268 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 FTLP19-201ENST00000433300 394 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 BRK1P2-201ENST00000442875 223 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 MRPL50P4-201ENST00000446432 475 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 RPS27P23-201ENST00000487608 251 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC093278.1-201ENST00000494700 600 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 HIGD1AP5-201ENST00000529959 259 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 SUB1P2-201ENST00000556401 297 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AC015818.6-201ENST00000584274 634 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 CKS1BP3-201ENST00000600888 237 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 AL121950.1-201ENST00000624993 2077 ntBASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ZC3H4Q9UPT8 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 CASC19-228ENST00000641414 1684 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 OR11H4-201ENST00000315409 1082 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RNU6-451P-201ENST00000362921 107 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RN7SKP124-201ENST00000364730 341 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 Y_RNA.381-201ENST00000365666 102 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RNU1-46P-201ENST00000384425 164 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AL122016.1-201ENST00000403365 367 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RNU4ATAC2P-201ENST00000408674 126 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RN7SKP125-201ENST00000410481 302 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 RPL37P18-201ENST00000411602 243 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 DUTP4-201ENST00000424782 475 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AL158073.1-201ENST00000426848 1104 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 CFL1P1-202ENST00000432948 411 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 CBX1P1-201ENST00000440184 427 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AL513533.1-201ENST00000453728 415 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 BTF3P5-201ENST00000457252 467 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC097493.1-201ENST00000463958 372 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC012123.2-201ENST00000485809 248 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC023194.1-201ENST00000493084 308 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC006390.1-201ENST00000508068 283 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC090424.1-201ENST00000535243 736 ntBASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.48□□□□□ -1.21
ZC3H4Q9UPT8 AC034105.3-201ENST00000565294 442 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms