Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AC119403.2-201ENST00000590960 598 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AP001521.1-201ENST00000609150 300 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AL161734.1-201ENST00000609720 557 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 MIR6071-201ENST00000616741 78 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AL355974.3-201ENST00000617383 467 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 MIR6861-201ENST00000618657 64 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AC000095.2-202ENST00000637415 154 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AC024651.2-201ENST00000562480 2098 ntBASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SALL4Q9UJQ4 AC093225.1-201ENST00000506867 1408 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 RNU4-79P-201ENST00000362764 141 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AL136131.1-201ENST00000406079 803 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC073069.1-201ENST00000428657 441 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 GAPDHP59-201ENST00000435908 267 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 CBX1P1-201ENST00000440184 427 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC132479.1-201ENST00000449160 144 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 RPS20P20-201ENST00000460498 340 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 RPL23AP40-201ENST00000487630 390 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 NIFKP7-201ENST00000503365 834 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 HMGN1P30-201ENST00000589286 268 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AL391646.1-201ENST00000603860 190 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AL136363.1-201ENST00000605349 337 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AL050343.2-201ENST00000607338 280 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC093788.1-201ENST00000609356 927 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC006504.8-201ENST00000621046 635 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 CASC19-284ENST00000642142 1868 ntBASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SALL4Q9UJQ4 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 AL512646.1-201ENST00000269395 1077 ntBASIC6.41□□□□□ -1.38
SALL4Q9UJQ4 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 244.7 ms