Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.73□□□□□ -1.33
UBE2OQ9C0C9 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC083837.1-201ENST00000565297 2994 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 FARSBP1-201ENST00000435808 1778 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC011455.2-201ENST00000599320 3336 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 RN7SKP124-201ENST00000364730 341 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 MIR606-201ENST00000384851 96 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 U8.14-201ENST00000390843 143 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 RNU6-908P-201ENST00000410160 94 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC004690.1-201ENST00000418216 328 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 USP9YP36-201ENST00000424581 829 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 SDCBPP2-201ENST00000424643 885 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC018644.1-201ENST00000429934 551 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC002486.1-201ENST00000435098 391 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 PPIAP17-201ENST00000438507 471 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 ACTR3P2-201ENST00000439585 1257 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC140076.1-201ENST00000449897 361 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC091965.3-201ENST00000506236 208 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC138866.2-201ENST00000508650 584 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC010343.2-201ENST00000510162 224 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AP001858.2-201ENST00000536213 601 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 H3F3BP2-201ENST00000583907 357 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AC104785.1-201ENST00000603220 588 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AL391646.1-201ENST00000603860 190 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 PRELID3BP8-201ENST00000604148 295 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 OR5BR1P-201ENST00000524992 1330 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 CDR1-202ENST00000625883 1485 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AL022323.4-201ENST00000623980 13120 ntBASIC6.72□□□□□ -1.33
UBE2OQ9C0C9 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 DOCK11P1-201ENST00000553480 5932 ntBASIC6.71□□□□□ -1.33
UBE2OQ9C0C9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 SNORA64.1-201ENST00000362600 132 ntBASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 Y_RNA.166-201ENST00000363730 102 ntBASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 AC104297.1-201ENST00000393779 870 ntBASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 AL589647.1-201ENST00000402485 466 ntBASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 AC007559.1-201ENST00000428736 355 ntBASIC6.71□□□□□ -1.34
UBE2OQ9C0C9 FABP7P2-201ENST00000429946 379 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms