Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NIPA2P2-201ENST00000496376 1083 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 HMGN1P12-201ENST00000499125 195 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AC104108.1-201ENST00000509930 412 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 RNU6-1225P-201ENST00000516336 65 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 PSMB7P1-201ENST00000556349 514 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 MIR3671-201ENST00000580455 88 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AL592295.2-201ENST00000612578 206 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 AP004607.9-201ENST00000618202 316 ntBASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TMEFF1Q8IYR6 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TMEFF1Q8IYR6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 DDX18P6-201ENST00000450119 1997 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC245100.2-201ENST00000454544 1679 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MT-TP-201ENST00000387461 68 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MIR550A3-201ENST00000390735 95 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 FAT1P1-201ENST00000406588 507 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 NACAP7-201ENST00000407371 609 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MIR1302-11-201ENST00000408051 138 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MIR1302-9-201ENST00000408365 138 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MIR1302-10-201ENST00000408734 138 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 RNU6-248P-201ENST00000410720 107 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AIMP1P1-201ENST00000418670 937 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 RPL31P54-201ENST00000429803 370 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 NDUFA5P4-201ENST00000436704 385 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 RPS18P6-201ENST00000476880 458 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC074255.1-201ENST00000511259 501 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 CYP4F27P-201ENST00000514557 494 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 LRRC34P2-201ENST00000514850 553 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC008802.1-201ENST00000519121 791 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 OR4C2P-201ENST00000530855 1064 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 HSPE1P2-201ENST00000554777 306 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 RN7SL708P-201ENST00000580952 299 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC060780.3-201ENST00000589464 80 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC022432.1-201ENST00000595739 310 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 BNIP3P11-201ENST00000603878 563 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC233280.2-201ENST00000603917 1070 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MIR1302-2-201ENST00000607096 138 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 AC010338.1-201ENST00000621823 717 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 MIR6863-201ENST00000636112 90 ntBASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.64□□□□□ -1.51
TMEFF1Q8IYR6 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms