Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
LCA10Q71F78 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LCA10Q71F78 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LCA10Q71F78 RIOK3P1-201ENST00000418778 1528 ntBASIC2.47□□□□□ -2.01
LCA10Q71F78 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
LCA10Q71F78 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LCA10Q71F78 MAPK10-362ENST00000641864 4484 ntBASIC2.46□□□□□ -2.01
LCA10Q71F78 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
LCA10Q71F78 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 MFSD8-216ENST00000641147 4009 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 GTF2H2B-203ENST00000508065 1432 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC010928.1-201ENST00000592477 1447 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AC009643.2-201ENST00000603543 1448 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LCA10Q71F78 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LCA10Q71F78 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LCA10Q71F78 ENSAP1-201ENST00000392855 326 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 NUDT19P3-201ENST00000404698 555 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 SNORA11.5-201ENST00000408163 128 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 GLS-204ENST00000409428 816 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 RN7SKP167-201ENST00000411047 285 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 RNU2-6P-201ENST00000411404 190 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.46□□□□□ -2.02
LCA10Q71F78 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 RPL7P46-201ENST00000425129 740 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 IFNNP1-201ENST00000429219 553 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 BX323845.1-201ENST00000432417 179 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AC092162.1-201ENST00000432828 434 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 RPS29P9-201ENST00000440360 171 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AL450023.3-201ENST00000440592 271 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 RPL7P59-201ENST00000447700 943 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 RPS26P41-201ENST00000450370 284 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC006463.2-201ENST00000473326 348 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 RN7SL799P-201ENST00000475891 298 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 MTCO3P35-201ENST00000485582 781 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC010350.1-201ENST00000504908 231 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 MTCO2P32-201ENST00000514865 403 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 RN7SKP260-201ENST00000516907 149 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC012339.2-201ENST00000523996 453 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC2.46□□□□□ -2.02
LCA10Q71F78 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 RPL7P50-201ENST00000600588 727 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AL606490.9-201ENST00000603331 271 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
LCA10Q71F78 AC015982.1-201ENST00000608113 465 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AL359535.1-201ENST00000612100 1087 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 RNA5SP440-201ENST00000612665 119 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AL390240.1-201ENST00000612950 384 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 AC019206.1-201ENST00000621938 425 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 CYP4Z2P-201ENST00000423332 1512 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC2.46□□□□□ -2.02
LCA10Q71F78 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC2.46□□□□□ -2.02
LCA10Q71F78 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.46□□□□□ -2.02
LCA10Q71F78 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
LCA10Q71F78 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
LCA10Q71F78 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
LCA10Q71F78 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LCA10Q71F78 AC099654.2-201ENST00000433031 1980 ntBASIC2.45□□□□□ -2.02
LCA10Q71F78 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LCA10Q71F78 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.45□□□□□ -2.02
LCA10Q71F78 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
LCA10Q71F78 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms