Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL499605.1-201ENST00000604628 403 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AP001521.1-201ENST00000609150 300 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AL392048.1-201ENST00000613946 534 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC092650.2-201ENST00000619984 902 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC004943.3-201ENST00000624116 600 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 AC010608.2-201ENST00000624830 470 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 SALL4P2-201ENST00000423288 2910 ntBASIC5.08□□□□□ -1.6
RNF220Q5VTB9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RNF220Q5VTB9 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 ZNF603P-201ENST00000405613 487 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 HMGN1P20-201ENST00000411849 300 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 E2F6P2-201ENST00000420708 748 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC093155.2-201ENST00000420734 937 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 RPL30P3-201ENST00000424262 333 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 OR6D1P-201ENST00000436165 939 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AL445567.1-201ENST00000439121 144 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC092647.3-201ENST00000443044 633 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AP000281.1-201ENST00000444036 316 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 VDAC2P4-201ENST00000452925 711 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC112206.1-201ENST00000468416 477 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC087879.1-201ENST00000474343 374 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 NCOR1P1-202ENST00000486162 291 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 PFN1P8-201ENST00000497012 543 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC006499.4-201ENST00000510947 694 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 NRBF2P4-201ENST00000520874 850 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC022790.1-201ENST00000522872 204 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 OR4A12P-201ENST00000530847 918 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC125611.1-201ENST00000549563 229 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 MTCYBP28-201ENST00000566728 1132 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC011840.5-201ENST00000582125 771 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC079315.1-201ENST00000602952 623 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 DUXAP11-201ENST00000603858 526 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC087283.1-201ENST00000604029 1074 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AC122133.1-201ENST00000613964 233 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 AP005431.1-201ENST00000618479 319 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 LINC01355-201ENST00000566551 5444 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 LINC01109-201ENST00000603837 3081 ntBASIC5.07□□□□□ -1.6
RNF220Q5VTB9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RNF220Q5VTB9 ERCC6-202ENST00000374127 1782 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SNORA4.1-201ENST00000364263 144 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL450338.1-201ENST00000407987 512 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 P2RY10P2-201ENST00000416730 913 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 NUP35P2-201ENST00000416748 943 ntBASIC5.06□□□□□ -1.6
RNF220Q5VTB9 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF220Q5VTB9 AC104843.2-201ENST00000427666 297 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms