Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 C1DP5-201ENST00000525775 383 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC139103.1-201ENST00000534696 1030 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC008759.1-201ENST00000589783 983 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 ELOCP28-201ENST00000590044 317 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC125494.3-201ENST00000602759 455 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC008782.1-201ENST00000603386 430 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC005034.4-201ENST00000603612 899 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC113194.1-201ENST00000606037 500 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AC019193.2-201ENST00000610012 634 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AP005019.3-201ENST00000620418 560 ntBASIC4.51□□□□□ -1.69
HLA-DPA1P20036 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HLA-DPA1P20036 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 MTCO1P18-201ENST00000455518 1419 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 SNORA56-201ENST00000383966 129 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 RNA5SP372-201ENST00000390836 115 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 RNA5SP332-201ENST00000391063 115 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AL078604.1-201ENST00000404609 466 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC009237.10-201ENST00000414112 510 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 UBTFL3-201ENST00000418934 1024 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 RPS26P40-201ENST00000435209 294 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 TPT1P13-201ENST00000449760 499 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AL645939.1-201ENST00000453429 797 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 UBTFL6-201ENST00000477929 1024 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 RN7SL817P-201ENST00000480777 288 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC090013.1-201ENST00000485147 480 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC005351.1-201ENST00000511152 786 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 RN7SKP92-201ENST00000517266 244 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC010306.1-201ENST00000523223 1117 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC027104.1-201ENST00000563702 681 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC084783.1-201ENST00000565846 910 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 SLC25A36P1-201ENST00000590111 465 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC083899.3-201ENST00000603413 594 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC079880.2-201ENST00000603790 1213 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC115286.1-201ENST00000604298 434 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AL353726.1-201ENST00000614041 1000 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC023509.5-201ENST00000617434 807 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 STMN1P1-201ENST00000617809 440 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 MIR6864-201ENST00000617935 70 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 AC024595.1-201ENST00000623088 387 ntBASIC4.5□□□□□ -1.69
HLA-DPA1P20036 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DPA1P20036 MFSD8-216ENST00000641147 4009 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 RNU6-543P-201ENST00000362576 108 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 RNA5SP22-201ENST00000365393 109 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 MIR708-201ENST00000390708 88 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 HMGB3P31-201ENST00000413333 595 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC008065.1-201ENST00000428525 348 ntBASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DPA1P20036 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms