Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MKKS-204ENST00000639674 192 ntBASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 AL079343.1-201ENST00000572358 1771 ntBASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CSB-PGBD3P0DP91 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC018809.2-201ENST00000602436 3823 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 BX284613.1-201ENST00000452221 1641 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC107982.1-201ENST00000507171 1300 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC103591.2-201ENST00000265259 766 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 RNU6-582P-201ENST00000362989 107 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 RNU5A-6P-201ENST00000384136 116 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 BTF3L4P3-201ENST00000418879 476 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AL590762.4-201ENST00000425885 253 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 VDAC2P4-201ENST00000452925 711 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 RN7SL222P-201ENST00000476452 299 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 RPS21P4-201ENST00000487122 248 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC074255.1-201ENST00000511259 501 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC073581.1-201ENST00000519036 575 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 DUXAP4-201ENST00000603046 613 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 YWHAQP7-201ENST00000603536 658 ntBASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 USP12-203ENST00000620323 349 ntTSL 3 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.6□□□□□ -1.19
CSB-PGBD3P0DP91 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AL121768.1-201ENST00000613917 2544 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC119744.1-201ENST00000454746 1715 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 RPL23P2-201ENST00000320371 421 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 Y_RNA.9-201ENST00000362354 101 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 SNORA63-201ENST00000363450 132 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 RNU2-22P-201ENST00000411266 212 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 RPS6P23-201ENST00000413224 722 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC073069.1-201ENST00000428657 441 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 USP9YP9-201ENST00000429406 715 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AL513175.1-201ENST00000431492 780 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC105252.1-201ENST00000503089 286 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC097173.1-201ENST00000505862 819 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 RN7SKP283-201ENST00000517197 270 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 COX6B1P6-201ENST00000522347 255 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC022832.1-201ENST00000530718 645 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 GTF2IP22-201ENST00000554443 182 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 HSPE1P2-201ENST00000554777 306 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AC138915.2-201ENST00000569776 97 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 RN7SL708P-201ENST00000580952 299 ntBASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC7.59□□□□□ -1.19
CSB-PGBD3P0DP91 MIR548AB-201ENST00000584917 84 ntBASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms