Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CACNA1BQ00975 AL603750.1-201ENST00000624216 1717 ntBASIC3.85□□□□□ -1.79
CACNA1BQ00975 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 AL445487.1-201ENST00000415694 1580 ntBASIC3.85□□□□□ -1.79
CACNA1BQ00975 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1BQ00975 SNORA48.8-201ENST00000391324 134 ntBASIC3.85□□□□□ -1.79
CACNA1BQ00975 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 AL591503.2-201ENST00000442314 1005 ntBASIC3.85□□□□□ -1.79
CACNA1BQ00975 AF213884.1-201ENST00000488102 463 ntBASIC3.85□□□□□ -1.79
CACNA1BQ00975 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 AC007066.2-202ENST00000566531 914 ntBASIC3.85□□□□□ -1.79
CACNA1BQ00975 MIR4660-201ENST00000583549 74 ntBASIC3.85□□□□□ -1.79
CACNA1BQ00975 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1BQ00975 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CACNA1BQ00975 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CACNA1BQ00975 AL132656.3-201ENST00000606384 1595 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 SNORA3.3-201ENST00000408712 125 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 RPL21P23-201ENST00000446654 460 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 CCRL1P1-201ENST00000449542 1053 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 AP000563.1-201ENST00000490865 758 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC027216.1-201ENST00000577726 685 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1BQ00975 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1BQ00975 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CACNA1BQ00975 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 RPS29P4-201ENST00000414733 161 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 NANOGNBP1-201ENST00000448444 480 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 EIF4A1P11-201ENST00000451239 222 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC010342.1-201ENST00000514047 877 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 AC135001.1-201ENST00000544546 283 ntBASIC3.84□□□□□ -1.79
CACNA1BQ00975 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.84□□□□□ -1.79
CACNA1BQ00975 AL133383.2-201ENST00000622958 2336 ntBASIC3.84□□□□□ -1.8
CACNA1BQ00975 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.84□□□□□ -1.8
CACNA1BQ00975 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.84□□□□□ -1.8
CACNA1BQ00975 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CACNA1BQ00975 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CACNA1BQ00975 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 RNA5SP80-201ENST00000410475 111 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 AC027176.2-201ENST00000559166 746 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 VN1R78P-201ENST00000597393 564 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 AC023762.1-201ENST00000603280 584 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 AC008013.2-202ENST00000637965 364 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 DDX18P5-201ENST00000534547 1306 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 snoU109.6-201ENST00000516831 118 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 RPL23AP53-201ENST00000521854 457 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 AC010480.1-201ENST00000624823 684 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 AC244258.1-201ENST00000637553 1071 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 FP325313.1-201ENST00000638228 703 ntBASIC3.83□□□□□ -1.8
CACNA1BQ00975 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.83□□□□□ -1.8
CACNA1BQ00975 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1BQ00975 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1BQ00975 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1BQ00975 MAPK10-338ENST00000641647 3362 ntBASIC3.82□□□□□ -1.8
CACNA1BQ00975 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1BQ00975 AL353743.1-202ENST00000431724 1695 ntBASIC3.82□□□□□ -1.8
CACNA1BQ00975 Y_RNA.40-201ENST00000362645 93 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms