Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC8.95□□□□□ -0.98
HOXD11P31277 KNOP1P3-201ENST00000446933 426 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
HOXD11P31277 MRPS5P3-201ENST00000515577 166 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 AC084851.1-201ENST00000529105 249 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 SEBOX-201ENST00000536498 666 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
HOXD11P31277 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC8.95□□□□□ -0.98
HOXD11P31277 AC119044.1-201ENST00000553227 404 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC8.95□□□□□ -0.98
HOXD11P31277 MIR4496-201ENST00000635896 61 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.95□□□□□ -0.98
HOXD11P31277 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC8.95□□□□□ -0.98
HOXD11P31277 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
HOXD11P31277 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 LPIN1-201ENST00000256720 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 PRRG3-201ENST00000370353 5977 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 C2orf42-201ENST00000264434 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 CENPCP1-201ENST00000533085 2578 ntBASIC8.95□□□□□ -0.98
HOXD11P31277 LIMA1-201ENST00000341247 3706 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.95□□□□□ -0.98
HOXD11P31277 WARS-201ENST00000344102 2690 ntTSL 5 BASIC8.95□□□□□ -0.98
HOXD11P31277 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 B4GALT6-202ENST00000306851 3891 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC8.95□□□□□ -0.98
HOXD11P31277 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
HOXD11P31277 LRRC27-204ENST00000368614 6374 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC8.94□□□□□ -0.98
HOXD11P31277 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
HOXD11P31277 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 LINC02028-202ENST00000432154 2666 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
HOXD11P31277 IGLV2-18-201ENST00000390310 367 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
HOXD11P31277 AL133388.1-201ENST00000404509 287 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 RPL30P3-201ENST00000424262 333 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
HOXD11P31277 AC004386.2-201ENST00000441858 148 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC8.94□□□□□ -0.98
HOXD11P31277 AC026254.2-201ENST00000475295 371 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 AL590867.2-201ENST00000492974 447 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 RNA5SP409-201ENST00000516815 109 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 ASB8-202ENST00000535055 657 ntTSL 2 BASIC8.94□□□□□ -0.98
HOXD11P31277 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC8.94□□□□□ -0.98
HOXD11P31277 MIR4450-201ENST00000583589 65 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 AC022400.4-201ENST00000604613 286 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 AL450472.3-201ENST00000615578 367 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 MIR6813-201ENST00000621638 56 ntBASIC8.94□□□□□ -0.98
HOXD11P31277 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.94□□□□□ -0.98
HOXD11P31277 JAKMIP2-206ENST00000616793 9272 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
HOXD11P31277 NET1-202ENST00000380359 3253 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 CD274-201ENST00000381573 3343 ntTSL 5 BASIC8.94□□□□□ -0.98
HOXD11P31277 FCGR2A-201ENST00000271450 2412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 ACTR6-201ENST00000188312 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 NHLRC3-202ENST00000379600 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 KDM3A-202ENST00000409064 4621 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 HPS5-203ENST00000396253 4725 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
HOXD11P31277 NRXN3-202ENST00000335750 2764 ntTSL 5 BASIC8.94□□□□□ -0.98
HOXD11P31277 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.94□□□□□ -0.98
HOXD11P31277 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC8.93□□□□□ -0.98
HOXD11P31277 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 CYB561A3-221ENST00000546151 3986 ntTSL 3 BASIC8.93□□□□□ -0.98
HOXD11P31277 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 KLHL7-AS1-201ENST00000419813 2564 ntTSL 2 BASIC8.93□□□□□ -0.98
HOXD11P31277 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 TRAPPC8-211ENST00000582539 4391 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 FCN1-202ENST00000616356 4369 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 B3GALNT1-201ENST00000320474 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.93□□□□□ -0.98
HOXD11P31277 UBE2L2-201ENST00000254302 429 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC8.93□□□□□ -0.98
HOXD11P31277 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 RNU6-1107P-201ENST00000364817 104 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 RNU6-336P-201ENST00000364891 107 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 SNORA30B-201ENST00000365319 129 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.93□□□□□ -0.98
HOXD11P31277 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 SNORD15A-201ENST00000384214 148 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 RNU6-159P-201ENST00000391080 106 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 AC005522.1-201ENST00000395416 346 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 CYB5AP4-201ENST00000396692 399 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 CYCSP49-201ENST00000420810 319 ntBASIC8.93□□□□□ -0.98
HOXD11P31277 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HOXD11P31277 AL359711.1-201ENST00000441999 123 ntBASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms