Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.57■□□□□ 0.56
AP4B1Q9Y6B7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 AC093787.1-201ENST00000450396 207 ntBASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 AC010980.2-201ENST00000587099 1412 ntBASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
AP4B1Q9Y6B7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 GUSBP6-202ENST00000438529 1198 ntBASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.55■□□□□ 0.56
AP4B1Q9Y6B7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
AP4B1Q9Y6B7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
AP4B1Q9Y6B7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms