Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC29.4■■■□□ 2.3
CDC42BPBQ9Y5S2 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 AL691432.2-201ENST00000607222 2038 ntBASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 AC026396.1-201ENST00000419388 421 ntBASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC29.39■■■□□ 2.3
CDC42BPBQ9Y5S2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC29.39■■■□□ 2.29
CDC42BPBQ9Y5S2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
CDC42BPBQ9Y5S2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 LINC00565-201ENST00000562710 2331 ntBASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC29.37■■■□□ 2.29
CDC42BPBQ9Y5S2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 AC036111.1-201ENST00000533973 1582 ntBASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC29.36■■■□□ 2.29
CDC42BPBQ9Y5S2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 GOLGA2P11-201ENST00000562660 1621 ntBASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
CDC42BPBQ9Y5S2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 AC246785.2-201ENST00000432512 513 ntBASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC29.34■■■□□ 2.29
CDC42BPBQ9Y5S2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 MIR3180-1-201ENST00000580374 94 ntBASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 MIR3180-3-201ENST00000584616 94 ntBASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC29.33■■■□□ 2.29
CDC42BPBQ9Y5S2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms