Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MIR1238-201ENST00000408483 83 ntBASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 KRT8P9-201ENST00000558927 1449 ntBASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGA3Q9Y5H0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 NAPSB-206ENST00000562112 1266 ntBASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 AL445228.2-201ENST00000605589 952 ntBASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 LINC01568-207ENST00000641790 1380 ntBASIC18.81■□□□□ 0.6
PCDHGA3Q9Y5H0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 AL590326.2-201ENST00000625139 305 ntBASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGA3Q9Y5H0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 KRT18P22-201ENST00000402024 1347 ntBASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AC113347.1-201ENST00000413321 391 ntBASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AC026271.3-201ENST00000571884 352 ntBASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AL031985.4-201ENST00000642138 673 ntBASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AP006587.1-201ENST00000534129 1502 ntBASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGA3Q9Y5H0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDHGA3Q9Y5H0 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms