Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA6Q9Y5G7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA6Q9Y5G7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 UNC93B2-201ENST00000285383 730 ntBASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 KSR1P1-201ENST00000446298 240 ntBASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 RBM17P1-201ENST00000453646 1190 ntBASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGA6Q9Y5G7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA6Q9Y5G7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA6Q9Y5G7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA6Q9Y5G7 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 NIFKP9-201ENST00000419265 221 ntBASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 AC145285.6-201ENST00000604632 637 ntBASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 KRT8P17-201ENST00000453110 1448 ntBASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDHGA6Q9Y5G7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms