Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 TMPOP1-202ENST00000424642 1267 ntBASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 AP006587.1-201ENST00000534129 1502 ntBASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB1Q9Y5F3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHB1Q9Y5F3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.39■□□□□ 0.7
PCDHB1Q9Y5F3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 YBX1P10-201ENST00000444752 975 ntBASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 CD177P1-201ENST00000606252 935 ntBASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB1Q9Y5F3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PCDHB1Q9Y5F3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.37■□□□□ 0.69
PCDHB1Q9Y5F3 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms