Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 TUBB8P6-201ENST00000436895 1288 ntBASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 AFG3L1P-217ENST00000557444 2447 ntBASIC17.76■□□□□ 0.43
RPH3AQ9Y2J0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RPH3AQ9Y2J0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 RPS2P55-201ENST00000397318 883 ntBASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 AC107956.1-201ENST00000494359 873 ntBASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 KRT18P21-201ENST00000515767 1272 ntBASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 RARRES2P10-201ENST00000564312 460 ntBASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RPH3AQ9Y2J0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 KRT18P16-201ENST00000510337 1294 ntBASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.73■□□□□ 0.43
RPH3AQ9Y2J0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms